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codex/graph-intelligence-phase1
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87 Commits

Author SHA1 Message Date
phernandez 66effb04a7 fix: upgrade cryptography and python-multipart for security advisories 
- cryptography 46.0.3 → 46.0.5 (subgroup attack on SECT curves)
- python-multipart 0.0.21 → 0.0.22 (arbitrary file write via non-default config)
- pillow alert dismissed — blocked by fastembed 0.7.4 pinning <12.0 (tracking qdrant/fastembed#606)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
 2026-02-26 14:42:20 -06:00
Paul Hernandez c44291830c chore: rename entity_type to note_type (#600) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
 2026-02-22 20:28:57 -06:00
Paul Hernandez 9515130b2a feat: upgrade fastmcp 2.12.3 to 3.0.1 with tool annotations (#598) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
 2026-02-21 12:28:30 -06:00
Paul Hernandez bbe6c1e8f3 chore: add ty as supplemental type checker (#594) 
Signed-off-by: phernandez <paul@basicmachines.co>
 2026-02-20 20:14:46 -06:00
Paul Hernandez 306e562281 chore: Make semantic deps default, auto-backfill embeddings, and default search to semantic (#586) 
Signed-off-by: phernandez <paul@basicmachines.co>
 2026-02-19 18:31:15 -06:00
Paul Hernandez 1428d18de1 fix: make semantic search dependencies optional extras (#566) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
 2026-02-12 21:46:26 -06:00
Paul Hernandez 07778790d3 feat: add semantic vector search for SQLite and Postgres (#550) 
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: bm-clawd <clawd@basicmemory.com>
Co-authored-by: bm-clawd <clawd@basicmemory.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
 2026-02-12 15:44:47 -06:00
Paul Hernandez 8072449a78 chore: Add fast feedback loop tooling (#538) 
Signed-off-by: phernandez <paul@basicmachines.co>
 2026-02-01 23:04:59 -06:00
Paul Hernandez 85835ae533 chore: Remove OpenPanel telemetry (#514) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
 2026-01-18 22:24:27 -06:00
Paul Hernandez 863e0a4e24 fix: prevent CLI commands from hanging on exit (Python 3.14) (#505) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
 2026-01-11 16:47:35 -06:00
Drew Cain c6baf58aa7 fix: update mcp to support protocol version 2025-11-25 (#501) 
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
 2026-01-03 12:39:11 -06:00
Paul Hernandez 856737fe3c feat: add anonymous usage telemetry (Homebrew-style opt-out) (#478) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
 2025-12-26 22:09:48 -06:00
Paul Hernandez 1fd680c3f1 feat: add auto-format files on save with built-in Python formatter (#474) 
Signed-off-by: Cedric Hurst <cedric@spantree.net>
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Cedric Hurst <cedric@spantree.net>
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
Co-authored-by: Sebastian B Otaegui <feniix@users.noreply.github.com>
Co-authored-by: Cedric Hurst <cedric@divideby0.io>
 2025-12-24 15:39:22 -06:00
Drew Cain f227ef6a86 fix: Pin FastMCP to 2.12.3 to fix MCP tools visibility (#464) 
Signed-off-by: Drew Cain <groksrc@gmail.com>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-12-20 08:54:44 -06:00
Paul Hernandez 4a43d7df4a remove logfire instrumentation 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-12-13 15:22:14 -06:00
phernandez 0ca02a7ebe add logfire instrumentation to services and repository code 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-11-28 12:47:29 -06:00
phernandez 7a8954c37e add extra logic for cloud-indexing improvements 2025-11-25 13:52:58 -06:00
Paul Hernandez fb5e9e1d77 feat: Add PostgreSQL database backend support (#439) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-11-20 11:20:29 -06:00
Paul Hernandez e78345ff25 feat: Streaming Foundation & Async I/O Consolidation (SPEC-19) (#384) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-10-21 09:03:59 -05:00
Paul Hernandez c0538ad2dd perf: Optimize sync/indexing for 43% faster performance (#352) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-10-12 14:41:44 -05:00
phernandez fd2b188645 Revert "feat: add optional logfire instrumentation for cloud mode distributed tracing" 
This reverts commit 1fa93ecbd2.
 2025-10-08 09:08:15 -05:00
phernandez 1fa93ecbd2 feat: add optional logfire instrumentation for cloud mode distributed tracing 2025-10-08 00:23:00 -05:00
Paul Hernandez f818702ab7 fix: enforce minimum 1-day timeframe for recent_activity to handle timezone issues (#318) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-09-27 23:37:00 -05:00
Paul Hernandez e0d8aeb149 feat: Basic memory cloud upload (#296) 
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Drew Cain <groksrc@gmail.com>
Co-authored-by: claude[bot] <209825114+claude[bot]@users.noreply.github.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Drew Cain <groksrc@gmail.com>
 2025-09-16 15:07:14 -05:00
jope-bm 3a6baf80fc feat: Merge Cloud auth (#291) 
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Joe P <joe@basicmemory.com>
Co-authored-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-09-09 14:48:17 -06:00
Paul Hernandez 473f70c949 chore: Cloud auth (#213) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-07-07 21:08:25 -05:00
Drew Cain 827f7cf3e3 fix: constrain fastmcp version to prevent breaking changes (#203) 
Signed-off-by: Drew Cain <groksrc@gmail.com>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-07-01 22:01:59 -05:00
phernandez ba8e3d112d chore: update dependencies for beta release 
- fastmcp 2.7.0 -> 2.7.1
- automated dependency updates
 2025-06-09 00:48:48 -05:00
phernandez b73aeb5ed8 feat: add view_note tool for formatted artifacts 
- Implement view_note tool for better note readability in Claude Desktop
- Display notes as formatted markdown artifacts with special instructions
- Extract titles from frontmatter or headings automatically
- Add comprehensive test suite with 100% coverage
- Include view_note in live testing plan and release notes

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
 2025-06-05 16:57:11 -05:00
phernandez f608cd13f1 add justfile instead of Makefile, add ignores to test coverage 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-06-05 12:26:31 -05:00
phernandez 2162ad57fe all tests passing 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-06-05 11:13:40 -05:00
phernandez c13d4b1511 chore: update dependencies via make update-deps 
- Updated authlib and other dependencies to latest versions
- Includes setuptools import fix for runtime compatibility

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
 2025-06-03 08:53:56 -05:00
Paul Hernandez 634486107b feat: v0.13.0 pre (#122) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-06-03 01:00:40 -05:00
bm-claudeai 020957cd76 feat: Multi-project support, OAuth authentication, and major improvements (#119) 
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
 2025-05-25 10:07:34 -05:00
phernandez 73ea91fe0d fix: add extra logic for permalink generation with mixed Latin unicode and Chinese characters 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-04-17 10:00:40 -05:00
Paul Hernandez 2934176331 fix: utf8 for all file reads/write/open instead of default platform encoding (#91) 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-04-08 10:55:01 -05:00
Paul Hernandez 78a3412bcf fix: run migrations and sync when starting mcp (#88) 2025-04-07 17:45:26 -05:00
phernandez 084c91ecce update basic-memory dep version 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-30 17:46:44 -05:00
Paul Hernandez 0743ade5fc fix: just delete db for reset db instead of using migrations. (#65) 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-28 19:11:11 -05:00
Paul Hernandez f1c95709cb fix: make logs for each process - mcp, sync, cli (#64) 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-28 19:10:43 -05:00
phernandez 731b502d36 docs: add help docs to mcp cli tools 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-25 13:01:11 -05:00
phernandez 0a1fdd8f15 update docs 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-24 22:46:47 -05:00
phernandez addeeb1e7f update user docs 
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-11 13:30:00 -05:00
Paul Hernandez 6a4bd54646 chore: Pre beta prep (#20) 
fix: drop search_index table on db reindex 
fix: ai_resource_guide.md path
chore: remove logfire
Signed-off-by: phernandez <paul@basicmachines.co>
 2025-03-07 14:31:35 -06:00
Paul Hernandez f8078cdd46 Fix: Beta testing fixes (#16) 
Co-authored-by: phernandez <phernandez@basicmachines.co>
 2025-02-28 20:23:53 -06:00
Paul Hernandez 093dab5f03 feat: Add enhanced prompts and resources (#15) 
## Summary
- Add comprehensive documentation to all MCP prompt modules
- Enhance search prompt with detailed contextual output formatting
- Implement consistent logging and docstring patterns across prompt
utilities
- Fix type checking in prompt modules

## Prompts Added/Enhanced
- `search.py`: New formatted output with relevance scores, excerpts, and
next steps
- `recent_activity.py`: Enhanced with better metadata handling and
documentation
- `continue_conversation.py`: Improved context management

## Resources Added/Enhanced
- `ai_assistant_guide`: Resource with description to give to LLM to
understand how to use the tools

## Technical improvements
- Added detailed docstrings to all prompt modules explaining their
purpose and usage
- Enhanced the search prompt with rich contextual output that helps LLMs
understand results
- Created a consistent pattern for formatting output across prompts
- Improved error handling in metadata extraction
- Standardized import organization and naming conventions
- Fixed various type checking issues across the codebase

This PR is part of our ongoing effort to improve the MCP's interaction
quality with LLMs, making the system more helpful and intuitive for AI
assistants to navigate knowledge bases.

🤖 Generated with [Claude Code](https://claude.ai/code)

---------

Co-authored-by: phernandez <phernandez@basicmachines.co>
 2025-02-27 20:48:56 -06:00
phernandez 0c59fd5e83 handle image response in tools WIP 2025-02-23 16:14:06 -06:00
phernandez f4b703e57f chore: refactor logging setup 2025-02-19 20:22:01 -06:00
phernandez 3e8e3e8961 fix: add logfire instrumentation to tools 2025-02-18 18:52:09 -06:00
Paul Hernandez 6da143898b feat: configure logfire telemetry (#12) 
Co-authored-by: phernandez <phernandez@basicmachines.co>
 2025-02-18 15:53:38 -06:00