Commit Graph

702 Commits

Author SHA1 Message Date
Paul Hernandez 4a43d7df4a remove logfire instrumentation
Signed-off-by: phernandez <paul@basicmachines.co>
2025-12-13 15:22:14 -06:00
Cedric Hurst 70bb10be1d fix: respect --project flag in background sync (fixes #434) (#436)
Signed-off-by: Cedric Hurst <cedric@spantree.net>
2025-12-08 12:58:18 -06:00
phernandez 1094210c52 fix broken sqlite migration
Signed-off-by: phernandez <paul@basicmachines.co>
2025-12-02 20:23:55 -06:00
phernandez 391feb639f add delete cascade to entity to delete search_index (postgres only)
Signed-off-by: phernandez <paul@basicmachines.co>
2025-12-02 10:04:21 -06:00
phernandez a920a9ff29 feat: Add project_id to Relation and Observation for efficient project-scoped queries
Denormalizes project_id onto Relation and Observation tables to enable
efficient project-scoped queries without joins. Migration backfills
from associated entity and adds pg_trgm extension with GIN indexes
for fuzzy link resolution on PostgreSQL.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-12-01 21:54:56 -06:00
phernandez 0eaf30bb06 remove conflict constraint name from relation_repository.py
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-30 19:31:09 -06:00
phernandez 0818bda565 feat: Add bulk insert with ON CONFLICT handling for relations
Add add_all_ignore_duplicates() method to RelationRepository for bulk
inserting relations with ON CONFLICT DO NOTHING. This handles cases
where the same [[wiki link]] appears multiple times in a document,
silently ignoring duplicates based on the (from_id, to_name, relation_type)
unique constraint.

Works with both SQLite and PostgreSQL dialects.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-30 14:59:52 -06:00
phernandez 6f99d2e551 perf: lightweight permalink resolution to avoid eager loading
Add optimized repository methods for resolve_permalink() that skip
eager loading of observations and relations:

- permalink_exists(): Check existence without loading entity
- get_file_path_for_permalink(): Get only file_path column
- get_permalink_for_file_path(): Get only permalink column
- get_all_permalinks(): Get all permalinks as strings
- get_permalink_to_file_path_map(): Bulk lookup mapping
- get_file_path_to_permalink_map(): Reverse mapping

Updated entity_service.resolve_permalink() to use these lightweight
methods instead of loading full entities with all relationships.

Also added logfire instrumentation to markdown utils.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-30 14:34:31 -06:00
phernandez 73d940e064 fix: observation parsing and permalink limits (#446)
1. Hashtag detection now checks for standalone words starting with #
   instead of just checking if # appears anywhere in content.
   This prevents HTML color codes like #4285F4 from being
   interpreted as hashtags.

2. Observation permalinks now truncate content to 200 chars
   to stay under PostgreSQL's btree index limit of 2704 bytes.

Added tests for both fixes.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-30 00:12:04 -06:00
phernandez c3678a11d2 truncate content_stems to fix Postgres 8KB index row limit
Large documents (like ~1MB conversation imports) exceed Postgres's 8KB
index row limit, causing ProgramLimitExceededError. Truncate content_stems
to 6000 characters (with headroom for other columns) before indexing.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-29 20:23:09 -06:00
phernandez 203d684c24 fix integrity error handling when setting forward relation refs
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-29 19:03:12 -06:00
phernandez a872220924 disable pooling for postgres db
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-29 13:24:47 -06:00
phernandez 7d763a66ff use entity.mtime for updated at in api
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-29 13:21:58 -06:00
phernandez b5d4fb559c fix: postgres/neon connection settings and search index dedupe
- Reduce db_pool_recycle from 3600s to 180s for Neon scale-to-zero
- Add connect_args for Neon serverless (statement cache, timeouts, app name)
- Dedupe observation permalinks in search indexing to avoid unique constraint violations
- Add tests for duplicate observation permalink handling

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-29 11:24:08 -06:00
phernandez 830775276d remove record_return=True from logfire spans
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-28 18:36:09 -06:00
phernandez ed894fc3ed get db pool sizes from config
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-28 16:50:57 -06:00
phernandez 704338edcf remove logfire.instrument_fastapi(app) from app.py
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-28 13:52:18 -06:00
phernandez 0ca02a7ebe add logfire instrumentation to services and repository code
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-28 12:47:29 -06:00
jope-bm 28cc5225a7 feat: Implement API v2 with ID-based endpoints (Phase 1) (#441)
Signed-off-by: Joe P <joe@basicmemory.com>
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Claude <noreply@anthropic.com>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
Co-authored-by: phernandez <paul@basicmachines.co>
2025-11-27 10:35:55 -06:00
phernandez 9b7bbc7116 formatting and logic change to resolve_relations, remove fuzzy search 2025-11-25 22:54:37 -06:00
phernandez 138c283d6c add postgres db type 2025-11-25 20:25:56 -06:00
phernandez 7a8954c37e add extra logic for cloud-indexing improvements 2025-11-25 13:52:58 -06:00
phernandez 10c7c19c03 fix db url for sqlite migrations
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-21 13:21:20 -06:00
Paul Hernandez fb5e9e1d77 feat: Add PostgreSQL database backend support (#439)
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
2025-11-20 11:20:29 -06:00
Cedric Hurst b004565df9 fix: handle periods in kebab_filenames mode (#424) 2025-11-18 06:49:55 -05:00
Drew Cain a258b73e1d chore: update version to 0.16.2 for v0.16.2 release 2025-11-16 21:30:59 -06:00
Drew Cain 6517e9845f fix: Use platform-native path separators in config.json (#429)
Signed-off-by: Drew Cain <groksrc@gmail.com>
Co-authored-by: Claude <noreply@anthropic.com>
2025-11-13 09:12:26 -06:00
Drew Cain 1af05392ee fix: Add rclone installation checks for Windows bisync commands (#427) 2025-11-12 14:22:14 -06:00
Brandon Mayes cad7019c89 fix: main project always recreated on project list command (#421) 2025-11-12 09:57:08 -05:00
phernandez 099c334e3d chore: update version to 0.16.1 for v0.16.1 release 2025-11-11 09:21:47 -06:00
Paul Hernandez e9d0a944a9 fix: Handle Windows line endings in rclone bisync (#422)
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-11 09:08:20 -06:00
phernandez caf3c14bb1 chore: update version to 0.16.0 for v0.16.0 release 2025-11-10 19:19:48 -06:00
phernandez e0fc59ea97 style: Format upload.py for better readability
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-10 19:15:03 -06:00
Paul Hernandez 49b2adc35c fix: skip archive files during cloud upload (#420)
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-11-10 19:04:49 -06:00
Paul Hernandez 1646572f69 fix: Rename write_note entity_type to note_type for clarity (#419)
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-11-10 19:02:50 -06:00
Paul Hernandez f0d7398815 fix: Quote string values in YAML frontmatter to handle special characters (#418)
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-11-10 18:13:48 -06:00
Paul Hernandez 581b7b17c6 fix: Add explicit type annotations to MCP tool parameters (#394)
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-11-10 17:02:17 -06:00
Paul Hernandez d775f7bab9 fix: Simplify search_notes schema by removing Optional wrappers (#395)
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-11-10 16:30:59 -06:00
Drew Cain fc01f6abaf fix: Replace Unicode arrows with ASCII for Windows compatibility (#414) 2025-11-10 16:30:41 -06:00
Paul Hernandez 4614fd09d5 fix: Handle dict objects in write_resource endpoint (#415)
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-11-10 16:30:27 -06:00
jope-bm 7ccec7eba2 feat: Add run_in_background parameter to sync endpoint with tests (#417)
Co-authored-by: Claude <noreply@anthropic.com>
2025-11-07 09:04:43 -07:00
Paul Hernandez 021af74545 fix: Strip duplicate headers in edit_note replace_section (#396)
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Drew Cain <groksrc@users.noreply.github.com>
2025-11-02 14:20:11 -06:00
phernandez 2ad0ee9d5d fix: Use force_full=true for database sync after project sync/bisync
After rclone synchronizes files between local and cloud storage, the
database needs to perform a full scan to ensure it captures all changes.
Previously, incremental sync (watermark optimization) could miss files
that were changed remotely.

Changes:
- project sync command now calls /project/sync?force_full=true
- project bisync command now calls /project/sync?force_full=true
- Ensures complete database refresh after file synchronization

This guarantees the database is fully in sync with the filesystem
after any rclone sync or bisync operation.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Signed-off-by: phernandez <paul@basicmachines.co>
2025-11-02 13:26:08 -06:00
Brandon Mayes c9946ecf1e fix: Various rclone fixes for cloud sync on Windows (#410)
Signed-off-by: Brandon Mayes <5610870+bdmayes@users.noreply.github.com>
Signed-off-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
Co-authored-by: phernandez <paul@basicmachines.co>
2025-11-02 11:26:57 -06:00
Drew Cain 0ba6f219f1 fix: Windows CLI Unicode encoding errors (#411)
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Claude <noreply@anthropic.com>
Signed-off-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
Co-authored-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Paul Hernandez <60959+phernandez@users.noreply.github.com>
2025-11-02 10:20:48 -06:00
Paul Hernandez 0b3272ae6e feat: SPEC-20 Simplified Project-Scoped Rclone Sync (#405)
Signed-off-by: phernandez <paul@basicmachines.co>
Signed-off-by: Claude <noreply@anthropic.com>
Co-authored-by: Claude <noreply@anthropic.com>
2025-11-02 09:35:26 -06:00
Paul Hernandez a7d7cc5ee6 fix: Normalize YAML frontmatter types to prevent AttributeError (#236) (#402)
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
2025-10-27 09:19:50 -05:00
Paul Hernandez c7e6eab02f feat: Add delete_notes parameter to remove project endpoint (#391)
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
2025-10-21 14:09:20 -05:00
Paul Hernandez bb8da31472 fix: Handle null, empty, and string 'None' title in markdown frontmatter (#387) (#389)
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Paul Hernandez <phernandez@users.noreply.github.com>
2025-10-21 09:29:19 -05:00
Paul Hernandez e78345ff25 feat: Streaming Foundation & Async I/O Consolidation (SPEC-19) (#384)
Signed-off-by: phernandez <paul@basicmachines.co>
Co-authored-by: Claude <noreply@anthropic.com>
2025-10-21 09:03:59 -05:00