diff --git a/scripts/bootstrap.sh b/scripts/bootstrap.sh
new file mode 100755
index 00000000..6e0f3bb2
--- /dev/null
+++ b/scripts/bootstrap.sh
@@ -0,0 +1,129 @@
+#!/usr/bin/env bash
+# Copyright 2015 Peter Goodman (peter@trailofbits.com), all rights reserved.
+
+
+# Fetch all dependencies.
+echo "${GREEN}Updating aptitude.${RESET}"
+sudo apt-get update
+
+echo "${GREEN}Downloading dependencies.${RESET}"
+sudo apt-get install -y binutils-dev build-essential
+sudo apt-get install -y cmake
+sudo apt-get install -y libgflags-dev libgflags2
+sudo apt-get install -y libgoogle-glog-dev libgoogle-glog0
+sudo apt-get install -y protobuf-compiler libprotobuf-dev libprotobuf8 python-protobuf
+
+RED=`tput setaf 1`
+GREEN=`tput setaf 2`
+YELLOW=`tput setaf 3`
+RESET=`tput sgr0`
+
+# Directory in which this script resides (i.e. McSema root dir).
+DIR=$(dirname $( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd ))
+
+# Versions of things.
+LLVM_VERSION=3.7.0
+PIN_VERSION=2.14-71313-gcc.4.4.7-linux
+
+
+echo "${GREEN}Downloading third-party code.${RESET}"
+mkdir -p $DIR/third_party
+
+# Download LLVM.
+echo "${YELLOW}Downloading LLVM ${LLVM_VERSION}.${RESET}"
+wget http://llvm.org/releases/3.7.0/llvm-${LLVM_VERSION}.src.tar.xz
+tar xf llvm-$LLVM_VERSION.src.tar.xz
+rm llvm-$LLVM_VERSION.src.tar.xz
+
+
+# Download Clang.
+echo "${YELLOW}Downloading Clang ${LLVM_VERSION}.${RESET}"
+wget http://llvm.org/releases/3.7.0/cfe-${LLVM_VERSION}.src.tar.xz
+tar xf cfe-${LLVM_VERSION}.src.tar.xz
+rm cfe-${LLVM_VERSION}.src.tar.xz
+
+
+# Download PIN.
+echo "${YELLOW}Downloading PIN ${PIN_VERSION}.${RESET}"
+wget http://software.intel.com/sites/landingpage/pintool/downloads/pin-2.14-71313-gcc.4.4.7-linux.tar.gz
+tar xf pin-${PIN_VERSION}.tar.gz
+rm pin-${PIN_VERSION}.tar.gz
+
+
+# Move things around.
+mv llvm-$LLVM_VERSION.src $DIR/third_party/llvm
+mv cfe-${LLVM_VERSION}.src $DIR/third_party/llvm/tools/clang
+mv pin-${PIN_VERSION} $DIR/third_party/pin
+
+
+# Compile LLVM & Clang.
+echo "${GREEN}Compiling LLVM and Clang.${RESET}"
+mkdir $DIR/third_party/llvm/build
+cd $DIR/third_party/llvm/build
+
+CFLAGS="-g3" CXXFLAGS="-g3" LDFLAGS="-g" \
+cmake ../ \
+    -DCMAKE_BUILD_TYPE:STRING=Debug \
+    -DLLVM_ENABLE_RTTI:BOOL=ON \
+    -DLLVM_TARGETS_TO_BUILD:STRING="X86;ARM;AArch64" \
+    -DLLVM_ENABLE_ASSERTIONS:BOOL=ON \
+    -DLLVM_ENABLE_THREADS:BOOL=ON
+make
+
+# Create the generated files directories.
+echo "${GREEN}Creating aut-generated files.${RESET}"
+cd $DIR
+mkdir -p $DIR/generated
+mkdir -p $DIR/generated/Arch
+mkdir -p $DIR/generated/Arch/X86
+mkdir -p $DIR/generated/CFG
+
+
+# Generate 32- and 64-bit x86 machine state modules for importing by
+# `cfg_to_bc`.
+echo "${YELLOW}Generating architecture-specific state files.${RESET}"
+cd $DIR
+$DIR/third_party/llvm/build/bin/clang++ -x c++ -std=gnu++11 -I$DIR -DMCSEMA_STATE_REG=Reg32 -E - \
+    < $DIR/mcsema/Arch/X86/State.inc \
+    > $DIR/generated/Arch/X86/State32.cpp
+    
+$DIR/third_party/llvm/build/bin/clang++ -x c++ -std=gnu++11 -I$DIR -DMCSEMA_STATE_REG=Reg64 -E - \
+    < $DIR/mcsema/Arch/X86/State.inc \
+    > $DIR/generated/Arch/X86/State64.cpp
+
+$DIR/third_party/llvm/build/bin/clang++ -std=gnu++11 -g3 -m32 -emit-llvm \
+    -c $DIR/generated/Arch/X86/State32.cpp \
+    -o $DIR/generated/Arch/X86/State32.bc
+
+$DIR/third_party/llvm/build/bin/clang++ -std=gnu++11 -g3 -m64 -emit-llvm \
+    -c $DIR/generated/Arch/X86/State64.cpp \
+    -o $DIR/generated/Arch/X86/State64.bc
+
+
+# Generate the protocol buffer file for the CFG definition. The lifter will
+# read in CFG protobuf files and output LLVM bitcode files.
+echo "${YELLOW}Generating protocol buffers.${RESET}"
+cd $DIR/generated/CFG
+cp $DIR/mcsema/CFG/CFG.proto $DIR/generated/CFG
+protoc --cpp_out=. CFG.proto
+protoc --python_out=. CFG.proto
+
+
+# Build McSema. McSema will be built with the above version of Clang.
+echo "${GREEN}Compiling McSema.${RESET}"
+cd $DIR
+mkdir $DIR/build
+cd $DIR/build
+cmake -G "Unix Makefiles" -DMCSEMA_DIR=$DIR ..
+make all
+
+
+# Find IDA.
+
+#echo "${GREEN}Finding IDA.${RESET}"
+#IDA=`locate idal64 | head -n 1`
+#if [ ! -e $IDA ] ; then
+#    echo "${RED}Error: Could not find IDA."
+#fi
+
+