Overhaul the pipeline configuration logic by collapsing all dynamic
configuration options, both for analyses and pipes into a single
dictionary. Change all the interfaces so that there is no longer
distinction between the configuration of an analysis and of pipes.
Expose these options to the command line via `--{name}-configuration`
options for each pipe/analysis that is applicable to the command-line
invocation.
Rework which information is transmitted in the pipeline metadata,
avoiding redundancy and moving some information there instead of
returning it every time a request is made.
Giacomo Vercesi