Many Pipeline objects (Globals, Ranks, Kinds, Targets in a TargetList)
were ordered by load order, this makes the playback of traces difficult.
Moreover the order of loading of pipeline files also influences the
ordering of other elements (Step, Analys{is,esLists}). These are also
ordered to prevent incosistent ordering.
`DocumentError`s are the inteded way of propagating errors from the
pipeline to the frontend when a location is required to inform the user
of the error whereabouts.
A logic issue existed when validating whether a `cl::opt<T>`
was set. This has been addressed by replacing `isDefaultOption`
method with `getNumOccurrences`, as the former one was not
meant to be used for checking if the option was set or not.
Likewise, the default Option itself is written to a `std::string`,
in method `get`; the latter is leveraged by `Invokable`.
`recalculateAllPossibleTarget` is now a private member of
PipelineManager This was done since all calls that can trigger a change
in the target list have been isolated and the call is done implicitly.
This removes rp_manager_recompute_all_available_targets from PipelineC,
since it was added as a stopgap until the above was implemented.
This commit introduces some changes to how the revng pipeline handles
serializing to disk. Specificaly:
* Pipeline globals (specifically model.yml) are better handled if they
are in a subdirectory. They are now saved in the "context"
subdirectory.
* In python:revng.api the pipeline is serialized whenever there is a
non-reproducible change to the state (e.g. binary upload or model
change).
In the case of analyses this is done conservatively by checking that
the diff produced is not empty.
* The logic for computing a step's subdirectory has been moved to the
pipeline runner, consequently if a step is asked to serialize it
will not create any subdirectories.
* Functionality for saving a single step/context has been exposed in
Pipeline C.
* Finally, all path concatenations are now handled by
llvm::sys::path::append, for extra os-agnosticism.
We need to prevent stub kinds used just to represent dead elements to be
displayed in the GUI and CL.
We do so by introducing a DeadKind which expands their targets to the
empty list.